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LHT2 lysine histidine transporter 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839057, updated on 18-Sep-2024

Summary

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Official Symbol
LHT2
Official Full Name
lysine histidine transporter 2
Primary source
TAIR:AT1G24400
Locus tag
AT1G24400
See related
Araport:AT1G24400
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AATL2; AMINO ACID TRANSPORTER-LIKE PROTEIN 2; ARABIDOPSIS LYSINE HISTIDINE TRANSPORTER 2; ATLHT2; F21J9.6; lysine histidine transporter 2
Summary
High-affinity transporter for neutral and acidic amino acids, expressed in tapetum tissue of anthers
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Genomic context

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See LHT2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (8651407..8653915, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene HXXXD-type acyl-transferase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Selective expression of a novel high-affinity transport system for acidic and neutral amino acids in the tapetum cells of Arabidopsis flowers. Lee YH, et al. Plant J, 2004 Oct. PMID 15361141
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_102286.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables acidic amino acid transmembrane transporter activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables amino acid transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables neutral L-amino acid transmembrane transporter activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within amino acid transmembrane transport IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within neutral amino acid transport IGI
Inferred from Genetic Interaction
more info
 PubMed 

General protein information

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Preferred Names
lysine histidine transporter 2
NP_564217.1
  • lysine histidine transporter 2 (LHT2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G67640.1); Has 4292 Blast hits to 4283 proteins in 340 species: Archae - 11; Bacteria - 170; Metazoa - 1210; Fungi - 747; Plants - 1636; Viruses - 0; Other Eukaryotes - 518 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    8651407..8653915 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102286.3 → NP_564217.1  lysine histidine transporter 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564217.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LRB5
    UniProtKB/TrEMBL
    A0A178WPS3, A0A5S9VWE0, A0A654ECK9
    Conserved Domains (1) summary
    pfam01490
    Location:29 → 425
    Aa_trans; Transmembrane amino acid transporter protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LRB5.1

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