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Acid phosphatase/vanadium-dependent haloperoxidase-related protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839051, updated on 18-Sep-2024

Summary

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Official Full Name
Acid phosphatase/vanadium-dependent haloperoxidase-related protein
Primary source
TAIR:AT1G24350
Locus tag
AT1G24350
See related
Araport:AT1G24350
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F3I6.29; F3I6_29
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (8638520..8640825, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nuclear pore complex protein Neighboring gene Six-hairpin glycosidases superfamily protein Neighboring gene ARM repeat superfamily protein Neighboring gene FAD/NAD(P)-binding oxidoreductase family protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene pseudo Neighboring gene no-apical-meristem-associated carboxy-terminal domain protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001084125.2
NM_001198155.1
NM_001332647.1
NM_001332648.1
NM_102281.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Acid phosphatase/vanadium-dependent haloperoxidase-related protein
NP_001077594.1
  • Acid phosphatase/vanadium-dependent haloperoxidase-related protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 1118 Blast hits to 1118 proteins in 412 species: Archae - 0; Bacteria - 737; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink).
NP_001185084.1
  • Acid phosphatase/vanadium-dependent haloperoxidase-related protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1).
NP_564215.1
  • Acid phosphatase/vanadium-dependent haloperoxidase-related protein; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 1124 Blast hits to 1124 proteins in 413 species: Archae - 0; Bacteria - 739; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    8638520..8640825 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102281.2 → NP_564215.1  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564215.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W2C8, A0A7G2DVU8, B9DG97, Q8LC64
    Conserved Domains (1) summary
    pfam02681
    Location:20 → 155
    DUF212; Divergent PAP2 family

  2. NM_001084125.2 → NP_001077594.1  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077594.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2DVU8, Q8GYY2, Q8LC64
    Conserved Domains (1) summary
    pfam02681
    Location:27 → 144
    DUF212; Divergent PAP2 family

  3. NM_001198155.1 → NP_001185084.1  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185084.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4I989, O04464
    Conserved Domains (1) summary
    pfam02681
    Location:27 → 170
    DUF212; Divergent PAP2 family

  4. NM_001332647.1 → NP_001323066.1  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AW28, A0A7G2DVU8, Q8LC64

  5. NM_001332648.1 → NP_001323067.1  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2DVU8, Q8LC64, Q9FYM6
Nucleotide Protein
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