U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MDP40 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838914, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
MDP40
Official Full Name
uncharacterized protein
Primary source
TAIR:AT1G23060
Locus tag
AT1G23060
See related
Araport:AT1G23060
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MICROTUBULE DESTABILIZING PROTEIN 40; T26J12.16; T26J12_16
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MDP40 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (8170693..8173085, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene ncRNA Neighboring gene organic solute transporter ostalpha protein (DUF300) Neighboring gene Auxin efflux carrier family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Arabidopsis microtubule destabilizing protein40 is involved in brassinosteroid regulation of hypocotyl elongation. Wang X, et al. Plant Cell, 2012 Oct. PMID 23115248, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. MDP40 is a key regulator in BR regulation of cortical microtubule reorientation and mediates hypocotyl growth. [microtubule destabilizing protein40] [MDP40]
    Title: Arabidopsis microtubule destabilizing protein40 is involved in brassinosteroid regulation of hypocotyl elongation.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help
NM_001332582.1
NM_001332583.1
NM_001332584.1
NM_102154.2
NM_202162.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
NP_564188.1
  • BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT1G70950.1); Has 449 Blast hits to 419 proteins in 98 species: Archae - 0; Bacteria - 40; Metazoa - 139; Fungi - 21; Plants - 158; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink).
NP_973891.1
  • BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT1G70950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    8170693..8173085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102154.2 → NP_564188.1  uncharacterized protein AT1G23060 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564188.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W2Z1, A0A384LAT5, A0A5S9VP85, Q93ZG1

  2. NM_001332583.1 → NP_001320400.1  uncharacterized protein AT1G23060 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W2Z1, A0A384LAT5, A0A5S9VP85, Q93ZG1

  3. NM_001332582.1 → NP_001320401.1  uncharacterized protein AT1G23060 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9VP85, O49310

  4. NM_001332584.1 → NP_001320399.1  uncharacterized protein AT1G23060 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9VP85, O49310

  5. NM_202162.2 → NP_973891.1  uncharacterized protein AT1G23060 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973891.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9VP85, O49310
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.