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Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838860, updated on 18-Sep-2024

Summary

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Official Full Name
Major facilitator superfamily protein
Primary source
TAIR:AT1G22540
Locus tag
AT1G22540
See related
Araport:AT1G22540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F12K8.12; F12K8_12
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (7963813..7966436)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene MICOS complex subunit Mic10-like protein (DUF543) Neighboring gene PATELLIN 2 Neighboring gene Major facilitator superfamily protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. AtNPF5.5, a nitrate transporter affecting nitrogen accumulation in Arabidopsis embryo. Léran S, et al. Sci Rep, 2015 Jan 22. PMID 25608465, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_102103.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables dipeptide transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables dipeptide transmembrane transporter activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables tripeptide transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within dipeptide transport IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within nitrate transmembrane transport IGI
Inferred from Genetic Interaction
more info
 PubMed 

General protein information

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Preferred Names
Major facilitator superfamily protein
NP_173670.2
  • Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72140.1); Has 7676 Blast hits to 7510 proteins in 1439 species: Archae - 0; Bacteria - 3907; Metazoa - 586; Fungi - 484; Plants - 2183; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7963813..7966436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102103.3 → NP_173670.2  Major facilitator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173670.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WP01, Q9SK95
    UniProtKB/TrEMBL
    A0A178W644
    Conserved Domains (1) summary
    cl21472
    Location:102 → 515
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0WP01.1

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