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emb2204 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838814, updated on 18-Sep-2024

Summary

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Official Symbol
emb2204
Official Full Name
uncharacterized protein
Primary source
TAIR:AT1G22090
Locus tag
AT1G22090
See related
Araport:AT1G22090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
embryo defective 2204; F2E2.16; F2E2_16
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Genomic context

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See emb2204 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (7795708..7797425)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene transcription factor TGA3 Neighboring gene Cysteine proteinases superfamily protein Neighboring gene ncRNA Neighboring gene Inositol-pentakisphosphate 2-kinase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_102059.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within embryo development ending in seed dormancy NAS
Non-traceable Author Statement
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_564157.1
  • embryo defective 2204 (emb2204); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT1G02770.1); Has 202 Blast hits to 201 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7795708..7797425
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102059.2 → NP_564157.1  uncharacterized protein AT1G22090 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564157.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LFT0, Q9LM50
    UniProtKB/TrEMBL
    A0A178WPQ3, A0A5S9VJB1, A0A654EC17
    Conserved Domains (1) summary
    TIGR01572
    Location:6 → 269
    A_thl_para_3677; Arabidopsis paralogous family TIGR01572
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LM50.2

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