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sks8 SKU5 similar 8 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838787, updated on 18-Sep-2024

Summary

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Official Symbol
sks8
Official Full Name
SKU5 similar 8
Primary source
TAIR:AT1G21850
Locus tag
AT1G21850
See related
Araport:AT1G21850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
SKU5 similar 8; T26F17.6; T26F17_6
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Genomic context

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See sks8 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Sequence:
Chromosome: 1; NC_003070.9 (7667803..7670530, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Plant thionin family protein Neighboring gene urease accessory protein F Neighboring gene SKU5 similar 7 Neighboring gene Plant thionin family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
SKU5 similar 8
NP_173603.1
  • SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7667803..7670530 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102033.1 → NP_173603.1  SKU5 similar 8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173603.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W9U5, A0A5S9VG21, Q9SFF2
    Conserved Domains (1) summary
    PLN02991
    Location:1 → 541
    PLN02991; oxidoreductase
Nucleotide Protein
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