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Phosphoenolpyruvate carboxylase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838742, updated on 18-Sep-2024

Summary

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Official Full Name
Phosphoenolpyruvate carboxylase family protein
Primary source
TAIR:AT1G21440
Locus tag
AT1G21440
See related
Araport:AT1G21440
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F24J8.7; F24J8_7
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (7502082..7504275, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box/RNI-like superfamily protein Neighboring gene tRNA-Gln Neighboring gene Flavin-binding monooxygenase family protein Neighboring gene SCARECROW-like 1 Neighboring gene Nodulin MtN3 family protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001332505.1
NM_101995.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast stroma HDA PubMed 

General protein information

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Preferred Names
Phosphoenolpyruvate carboxylase family protein
NP_173565.2
  • Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: isocitrate lyase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase/phosphorylmutase, conserved site (InterPro:IPR018523), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 8771 Blast hits to 8771 proteins in 1489 species: Archae - 119; Bacteria - 4900; Metazoa - 32; Fungi - 522; Plants - 172; Viruses - 0; Other Eukaryotes - 3026 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7502082..7504275 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101995.4 → NP_173565.2  Phosphoenolpyruvate carboxylase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173565.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WDK8, Q501F7
    Conserved Domains (1) summary
    cd00377
    Location:44 → 288
    ICL_PEPM; Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage. Known members are phosphoenolpyruvate mutase (PEPM), phosphonopyruvate hydrolase (PPH), carboxyPEP mutase (CPEP mutase), oxaloacetate hydrolase (OAH), isocitrate ...

  2. NM_001332505.1 → NP_001320652.1  Phosphoenolpyruvate carboxylase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WDK8, Q501F7
    Conserved Domains (1) summary
    cd00377
    Location:44 → 288
    ICL_PEPM; Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage. Known members are phosphoenolpyruvate mutase (PEPM), phosphonopyruvate hydrolase (PPH), carboxyPEP mutase (CPEP mutase), oxaloacetate hydrolase (OAH), isocitrate ...
Nucleotide Protein
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