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WAK5 wall associated kinase 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838718, updated on 18-Sep-2024

Summary

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Official Symbol
WAK5
Official Full Name
wall associated kinase 5
Primary source
TAIR:AT1G21230
Locus tag
AT1G21230
See related
Araport:AT1G21230
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F16F4.9; F16F4_9; wall associated kinase 5
Summary
encodes a wall-associated kinase
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Genomic context

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See WAK5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (7429895..7432477)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene wall associated kinase 4 Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene wall associated kinase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A cluster of five cell wall-associated receptor kinase genes, Wak1-5, are expressed in specific organs of Arabidopsis. He ZH, et al. Plant Mol Biol, 1999 Apr. PMID 10380805
  2. Interaction of the Arabidopsis receptor protein kinase Wak1 with a glycine-rich protein, AtGRP-3. Park AR, et al. J Biol Chem, 2001 Jul 13. PMID 11335717
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_101976.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables polysaccharide binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
wall associated kinase 5
NP_173546.1
  • wall associated kinase 5 (WAK5); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: cell wall-associated kinase (TAIR:AT1G21250.1); Has 137298 Blast hits to 123121 proteins in 4733 species: Archae - 125; Bacteria - 14072; Metazoa - 61552; Fungi - 9626; Plants - 33595; Viruses - 427; Other Eukaryotes - 17901 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7429895..7432477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101976.2 → NP_173546.1  wall associated kinase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173546.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LMN7
    UniProtKB/TrEMBL
    A0A5S9VEG7
    Conserved Domains (3) summary
    cd14066
    Location:414 → 681
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam07645
    Location:279 → 320
    EGF_CA; Calcium-binding EGF domain
    pfam13947
    Location:26 → 125
    GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LMN7.1

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