U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Cupredoxin superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838705, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Cupredoxin superfamily protein
Primary source
TAIR:AT1G21090
Locus tag
AT1G21090
See related
Araport:AT1G21090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T22I11.8; T22I11_8
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (7384560..7386580)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Nucleotide-sugar transporter family protein Neighboring gene DNAJ heat shock N-terminal domain-containing protein Neighboring gene O-methyltransferase family protein Neighboring gene O-methyltransferase family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. Borner GH, et al. Plant Physiol, 2003 Jun. PMID 12805588, Free PMC Article
  2. Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. Borner GH, et al. Plant Physiol, 2002 Jun. PMID 12068095, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_001332484.1
NM_101963.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in membrane TAS
Traceable Author Statement
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Cupredoxin superfamily protein
NP_564135.1
  • Cupredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972); Has 232 Blast hits to 228 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 9; Plants - 195; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7384560..7386580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101963.4 → NP_564135.1  Cupredoxin superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564135.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9VCR6, A0A654EMI1, A0A7G2DWB4, Q0V805
    Conserved Domains (2) summary
    PRK06549
    Location:126 → 186
    PRK06549; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
    cl19115
    Location:30 → 123
    Cupredoxin; Cupredoxin superfamily

  2. NM_001332484.1 → NP_001321361.1  Cupredoxin superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AQL6, Q9LPU4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.