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DNAJ heat shock N-terminal domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838704, updated on 18-Sep-2024

Summary

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Official Full Name
DNAJ heat shock N-terminal domain-containing protein
Primary source
TAIR:AT1G21080
Locus tag
AT1G21080
See related
Araport:AT1G21080
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T22I11.9; T22I11_9
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Sequence:
Chromosome: 1; NC_003070.9 (7378538..7382661, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene secondary thiamine-phosphate synthase enzyme Neighboring gene Nucleotide-sugar transporter family protein Neighboring gene Cupredoxin superfamily protein Neighboring gene O-methyltransferase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
  2. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001160881.2
NM_001198123.1
NM_101962.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
DNAJ heat shock N-terminal domain-containing protein
NP_001154353.1
  • DNAJ heat shock N-terminal domain-containing protein; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G76700.1); Has 441 Blast hits to 432 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 196; Plants - 148; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).
NP_001185052.1
  • DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G76700.1).
NP_564134.1
  • DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G76700.1); Has 22938 Blast hits to 22804 proteins in 3197 species: Archae - 169; Bacteria - 9211; Metazoa - 3964; Fungi - 2251; Plants - 2330; Viruses - 17; Other Eukaryotes - 4996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7378538..7382661 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001198123.1 → NP_001185052.1  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185052.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4HWD5
    Conserved Domains (3) summary
    COG0484
    Location:2 → 95
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    pfam00226
    Location:6 → 68
    DnaJ; DnaJ domain
    pfam14308
    Location:132 → 312
    DnaJ-X; X-domain of DnaJ-containing

  2. NM_101962.4 → NP_564134.1  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564134.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W555, Q9LPU3
    Conserved Domains (2) summary
    pfam00226
    Location:6 → 68
    DnaJ; DnaJ domain
    pfam14308
    Location:132 → 312
    DnaJ-X; X-domain of DnaJ-containing

  3. NM_001160881.2 → NP_001154353.1  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001154353.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q93ZH5
    Conserved Domains (1) summary
    pfam14308
    Location:45 → 225
    DnaJ-X; X-domain of DnaJ-containing
Nucleotide Protein
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