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transport/golgi organization-like protein (DUF833) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838664, updated on 18-Sep-2024

Summary

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Official Full Name
transport/golgi organization-like protein (DUF833)
Primary source
TAIR:AT1G20740
Locus tag
AT1G20740
See related
Araport:AT1G20740
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F2D10.23; F2D10_23
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (7200332..7201737)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene ncRNA Neighboring gene RAD3-like DNA-binding helicase protein Neighboring gene Calcium-binding EF hand family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
transport/golgi organization-like protein (DUF833)
NP_173497.1
  • Protein of unknown function (DUF833); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20730.1); Has 322 Blast hits to 322 proteins in 133 species: Archae - 0; Bacteria - 194; Metazoa - 18; Fungi - 2; Plants - 74; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7200332..7201737
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001332463.1 → NP_001322474.1  transport/golgi organization-like protein (DUF833) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AU60, A0A7G2DY97

  2. NM_101926.1 → NP_173497.1  transport/golgi organization-like protein (DUF833) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173497.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9VBZ4, F4HUN7
    Conserved Domains (1) summary
    cl01315
    Location:34 → 250
    TANGO2; Transport and Golgi organization 2
Nucleotide Protein
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