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TTF-type zinc finger protein with HAT dimerization domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838509, updated on 18-Sep-2024

Summary

Official Full Name
TTF-type zinc finger protein with HAT dimerization domain-containing protein
Primary source
TAIR:AT1G19260
Locus tag
AT1G19260
See related
Araport:AT1G19260
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T29M8.13; T29M8_13
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Genomic context

Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (6657260..6659569, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Riboflavin synthase-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene flavin-dependent monooxygenase 1 Neighboring gene DA1 Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene ncRNA

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 
located_in plasmodesma HDA PubMed 

General protein information

Preferred Names
TTF-type zinc finger protein with HAT dimerization domain-containing protein
NP_173360.1
  • TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6657260..6659569 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101784.1NP_173360.1  TTF-type zinc finger protein with HAT dimerization domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173360.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2EMI1, F4IE28
    Conserved Domains (2) summary
    pfam05699
    Location:686743
    Dimer_Tnp_hAT; hAT family C-terminal dimerization region
    pfam14291
    Location:110346
    DUF4371; Domain of unknown function (DUF4371)