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TET11 tetraspanin11 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838433, updated on 18-Sep-2024

Summary

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Official Symbol
TET11
Official Full Name
tetraspanin11
Primary source
TAIR:AT1G18520
Locus tag
AT1G18520
See related
Araport:AT1G18520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15H18.1; F15H18_1; tetraspanin11
Summary
Member of TETRASPANIN family
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Genomic context

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See TET11 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (6374906..6376333)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene methylthioalkylmalate synthase-like 4 Neighboring gene tetraspanin Neighboring gene EF hand calcium-binding protein family Neighboring gene Ribosomal protein L6 family protein Neighboring gene ATP binding microtubule motor family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

NM_101710.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in auxin-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
tetraspanin11
NP_564056.1
  • tetraspanin11 (TET11); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: tetraspanin8 (TAIR:AT2G23810.1); Has 423 Blast hits to 421 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 419; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6374906..6376333
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101710.3 → NP_564056.1  tetraspanin11 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564056.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0ME76, Q8LAM6, Q9LPR6
    UniProtKB/TrEMBL
    A0A178WFM7
    Conserved Domains (1) summary
    pfam00335
    Location:6 → 262
    Tetraspannin; Tetraspanin family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LPR6.1

Gene LinkOut

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