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glycosyl hydrolase family 81 protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838411, updated on 18-Sep-2024

Summary

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Official Full Name
glycosyl hydrolase family 81 protein
Primary source
TAIR:AT1G18310
Locus tag
AT1G18310
See related
Araport:AT1G18310
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15H18.17; F15H18_17
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (6301200..6303956, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DUF4228 domain protein Neighboring gene nudix hydrolase homolog 4 Neighboring gene Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein Neighboring gene Homeodomain-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables endo-1,3(4)-beta-glucanase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
glycosyl hydrolase family 81 protein
NP_173267.1
  • glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: cell wall macromolecule catabolic process; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT5G15870.1); Has 441 Blast hits to 435 proteins in 142 species: Archae - 0; Bacteria - 86; Metazoa - 4; Fungi - 179; Plants - 58; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6301200..6303956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101689.1 → NP_173267.1  glycosyl hydrolase family 81 protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173267.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WHS9, F4IAQ0
    Conserved Domains (1) summary
    pfam03639
    Location:16 → 646
    Glyco_hydro_81; Glycosyl hydrolase family 81
Nucleotide Protein
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