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HAB2 homology to ABI2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838330, updated on 18-Sep-2024

Summary

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Official Symbol
HAB2
Official Full Name
homology to ABI2
Primary source
TAIR:AT1G17550
Locus tag
AT1G17550
See related
Araport:AT1G17550
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtHAB2; F1L3.38; homology to ABI2
Summary
Protein Phosphatase 2C
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Genomic context

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See HAB2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (6034270..6037398)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene kinase with adenine nucleotide alpha hydrolases-like domain-containing protein Neighboring gene Protein phosphatase 2C family protein Neighboring gene Ribosomal protein L14p/L23e family protein Neighboring gene tRNA-Ser

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular basis for the selective and ABA-independent inhibition of PP2CA by PYL13. Li W, et al. Cell Res, 2013 Dec. PMID 24165892, Free PMC Article
  2. PYRABACTIN RESISTANCE1-LIKE8 plays an important role for the regulation of abscisic acid signaling in root. Antoni R, et al. Plant Physiol, 2013 Feb. PMID 23370718, Free PMC Article
  3. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Data indicate that PYL8 interacted in vivo with at least five PP2Cs, namely HAB1, HAB2, ABI1, ABI2, and PP2CA.
    Title: PYRABACTIN RESISTANCE1-LIKE8 plays an important role for the regulation of abscisic acid signaling in root.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001332312.1
NM_101618.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables myosin phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
homology to ABI2
NP_173199.2
  • homology to ABI2 (HAB2); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI1 (TAIR:AT1G72770.3); Has 6552 Blast hits to 6537 proteins in 424 species: Archae - 4; Bacteria - 229; Metazoa - 1602; Fungi - 744; Plants - 2705; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6034270..6037398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101618.3 → NP_173199.2  homology to ABI2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173199.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GWS8, Q9LNP9
    UniProtKB/TrEMBL
    A0A178WLC3, A0A5S9UUN1, A0A654ELH3
    Conserved Domains (1) summary
    smart00332
    Location:179 → 499
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain

  2. NM_001332312.1 → NP_001322988.1  homology to ABI2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GWS8, Q9LNP9
    UniProtKB/TrEMBL
    A0A178WLC3, A0A5S9UUN1, A0A654ELH3
    Conserved Domains (1) summary
    smart00332
    Location:179 → 499
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LNP9.2

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