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LOW protein: protein phosphatase 1 regulatory subunit-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838308, updated on 18-Sep-2024

Summary

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Official Full Name
LOW protein: protein phosphatase 1 regulatory subunit-like protein
Primary source
TAIR:AT1G17360
Locus tag
AT1G17360
See related
Araport:AT1G17360
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F28G4.18; F28G4_18
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Genomic context

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Location:
chromosome: 1
Exon count:
10
Sequence:
Chromosome: 1; NC_003070.9 (5946448..5951561)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene NADH:ubiquinone oxidoreductase intermediate-associated protein 30 Neighboring gene ncRNA Neighboring gene oligouridylate binding protein 1B Neighboring gene jasmonate-zim-domain protein 5 Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_101597.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
LOW protein: protein phosphatase 1 regulatory subunit-like protein
NP_173179.4
  • BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1); Has 9949 Blast hits to 7480 proteins in 576 species: Archae - 12; Bacteria - 1007; Metazoa - 3636; Fungi - 982; Plants - 444; Viruses - 50; Other Eukaryotes - 3818 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    5946448..5951561
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101597.6 → NP_173179.4  LOW protein: protein phosphatase 1 regulatory subunit-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173179.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WJ84, A0A654ELF1, Q9LQI8
Nucleotide Protein
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