U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TPS2 trehalose-6-phosphate synthase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838269, updated on 18-Sep-2024

Summary

Official Symbol
TPS2
Official Full Name
trehalose-6-phosphate synthase
Primary source
TAIR:AT1G16980
Locus tag
AT1G16980
See related
Araport:AT1G16980
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATTPS2; F6I1.1; F6I1_1; TREHALOSE -6-PHOSPHATASE SYNTHASE S2; trehalose-phosphatase/synthase 2
Summary
Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active but no trehalose phosphatase (TPP)-like domain.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See TPS2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
17
Sequence:
Chromosome: 1; NC_003070.9 (5807200..5811610)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Ubiquitin domain-containing protein Neighboring gene ATP-dependent DNA helicase 2 subunit Ku70-like protein Neighboring gene trehalose-phosphatase/synthase 3 Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

General gene information

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 
enables alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within trehalose biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
trehalose-6-phosphate synthase
NP_173142.2
  • trehalose-phosphatase/synthase 2 (TPS2); CONTAINS InterPro DOMAIN/s: Alpha,alpha-trehalose-phosphate synthase (InterPro:IPR012766), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 3 (TAIR:AT1G17000.1); Has 3329 Blast hits to 3259 proteins in 973 species: Archae - 45; Bacteria - 1730; Metazoa - 120; Fungi - 651; Plants - 352; Viruses - 0; Other Eukaryotes - 431 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    5807200..5811610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101559.2NP_173142.2  trehalose-6-phosphate synthase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4I627, Q9FZ57
    UniProtKB/TrEMBL
    A0A5S9USR7, A0A654EC27
    Conserved Domains (1) summary
    PLN03063
    Location:2786
    PLN03063; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
  2. NM_001332273.1NP_001321461.1  trehalose-6-phosphate synthase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AQY2