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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838248, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT1G16770
Locus tag
AT1G16770
See related
Araport:AT1G16770
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17F16.12; F17F16_12
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (5737839..5739377)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene kinase with adenine nucleotide alpha hydrolases-like domain-containing protein Neighboring gene Inorganic H pyrophosphatase family protein Neighboring gene ribosomal protein-like protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene 7-dehydrocholesterol reductase-like protein Neighboring gene vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001084079.2
NM_001332257.1
NM_101538.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_001077548.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 103 Blast hits to 103 proteins in 50 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 65; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
NP_173121.1
  • unknown protein; Has 109 Blast hits to 109 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 71; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    5737839..5739377
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001084079.2 → NP_001077548.1  uncharacterized protein AT1G16770 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077548.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9URK6, A0A654EBI0, Q45GQ0

  2. NM_101538.2 → NP_173121.1  uncharacterized protein AT1G16770 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173121.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9URK6, A0A654EBI0, Q9FWR1

  3. NM_001332257.1 → NP_001321384.1  uncharacterized protein AT1G16770 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AQP5
Nucleotide Protein
Heading Accession and Version

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