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Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838236, updated on 18-Sep-2024

Summary

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Official Full Name
Protein kinase superfamily protein
Primary source
TAIR:AT1G16670
Locus tag
AT1G16670
See related
Araport:AT1G16670
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F19K19.4; F19K19_4
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (5697216..5699870)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene pseudo Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene Enhancer of polycomb-like transcription factor protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Oviposition by pierid butterflies triggers defense responses in Arabidopsis. Little D, et al. Plant Physiol, 2007 Feb. PMID 17142483, Free PMC Article
  2. Plasma Membrane CRPK1-Mediated Phosphorylation of 14-3-3 Proteins Induces Their Nuclear Import to Fine-Tune CBF Signaling during Cold Response. Liu Z, et al. Mol Cell, 2017 Apr 6. PMID 28344081
  3. Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. Nemoto K, et al. Phytochemistry, 2011 Jul. PMID 21477822
  4. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. CRPK1 is essential for the nuclear translocation of 14-3-3 proteins and for 14-3-3 function in freezing tolerance.
    Title: Plasma Membrane CRPK1-Mediated Phosphorylation of 14-3-3 Proteins Induces Their Nuclear Import to Fine-Tune CBF Signaling during Cold Response.
Submit: New GeneRIF Correction

General gene information

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Homology

NM_101527.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein serine/threonine kinase activity HDA PubMed 
enables protein serine/threonine kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within protein autophosphorylation HDA PubMed 
acts_upstream_of_or_within response to cold IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in response to freezing IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in response to insect IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to molecule of bacterial origin IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Protein kinase superfamily protein
NP_564003.1
  • Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09010.1); Has 119178 Blast hits to 117668 proteins in 4361 species: Archae - 113; Bacteria - 13232; Metazoa - 43958; Fungi - 10262; Plants - 33662; Viruses - 406; Other Eukaryotes - 17545 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    5697216..5699870
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101527.4 → NP_564003.1  Protein kinase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564003.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q93YN1, Q9FX80
    UniProtKB/TrEMBL
    A0A178W8D4, A0A5S9URE7, A0A7G2DU59
    Conserved Domains (1) summary
    cd14066
    Location:47 → 316
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q93YN1.1

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