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CYCB3;1 cyclin b3;1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838202, updated on 18-Sep-2024

Summary

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Official Symbol
CYCB3;1
Official Full Name
cyclin b3;1
Primary source
TAIR:AT1G16330
Locus tag
AT1G16330
See related
Araport:AT1G16330
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
cyclin b3;1; F3O9.13; F3O9_13
Summary
core cell cycle genes
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Genomic context

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See CYCB3;1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
23
Sequence:
Chromosome: 1; NC_003070.9 (5582387..5587461, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Cation efflux family protein Neighboring gene plant/protein (DUF2358) Neighboring gene Aldolase superfamily protein Neighboring gene Aldolase-type TIM barrel family protein Neighboring gene LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of Arabidopsis meiotic cyclins reveals functional diversification among plant cyclin genes. Bulankova P, et al. PLoS Genet, 2013 May. PMID 23671425, Free PMC Article
  2. Functional modules in the Arabidopsis core cell cycle binary protein-protein interaction network. Boruc J, et al. Plant Cell, 2010 Apr. PMID 20407024, Free PMC Article
  3. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

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Preferred Names
cyclin b3;1
NP_173083.3
  • cyclin b3;1 (CYCB3;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 4427 Blast hits to 4424 proteins in 376 species: Archae - 0; Bacteria - 0; Metazoa - 2128; Fungi - 557; Plants - 1053; Viruses - 34; Other Eukaryotes - 655 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    5582387..5587461 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101499.4 → NP_173083.3  cyclin b3;1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173083.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W969, A0A5S9UR21, A0A7G2DX80
    Conserved Domains (2) summary
    cd20507
    Location:392 → 521
    CYCLIN_CCNB1-like_rpt1; first cyclin box found in cyclin-B1 (CCNB1)-like family
    cd20511
    Location:526 → 642
    CYCLIN_AtCycB-like_rpt2; second cyclin box found in Arabidopsis thaliana B-type cyclins (CycBs) and similar proteins
Nucleotide Protein
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