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kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838196, updated on 18-Sep-2024

Summary

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Official Full Name
kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein
Primary source
TAIR:AT1G16270
Locus tag
AT1G16270
See related
Araport:AT1G16270
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F3O9.7; F3O9_7
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Genomic context

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Location:
chromosome: 1
Exon count:
9
Sequence:
Chromosome: 1; NC_003070.9 (5562861..5568368)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene syntaxin of plants 51 Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Wall-associated kinase family protein Neighboring gene RNA helicase 36 Neighboring gene transglycosylase Neighboring gene glyceraldehyde-3-phosphate dehydrogenase of plastid 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide analysis and experimentation of plant serine/ threonine/tyrosine-specific protein kinases. Rudrabhatla P, et al. Plant Mol Biol, 2006 Jan. PMID 16429265
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001198081.2
NM_001332219.1
NM_101493.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein serine/threonine/tyrosine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein
NP_001185010.1
  • Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G79570.1).
NP_173077.1
  • Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G79570.1); Has 120346 Blast hits to 118920 proteins in 4807 species: Archae - 116; Bacteria - 12493; Metazoa - 46290; Fungi - 10609; Plants - 32462; Viruses - 473; Other Eukaryotes - 17903 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    5562861..5568368
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001198081.2 → NP_001185010.1  kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185010.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WQY6, A0A5S9UQU0, A0A654ECB9, Q9SA26
    Conserved Domains (2) summary
    cd06410
    Location:168 → 264
    PB1_UP2; Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. ...
    cd13999
    Location:869 → 1126
    STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases

  2. NM_101493.4 → NP_173077.1  kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173077.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WQY6, A0A5S9UQU0, A0A654ECB9, Q9SA26
    Conserved Domains (2) summary
    cd06410
    Location:168 → 264
    PB1_UP2; Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. ...
    cd13999
    Location:869 → 1126
    STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases

  3. NM_001332219.1 → NP_001321701.1  kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WQY6, A0A5S9UQU0, A0A654ECB9, Q9SA26
    Conserved Domains (2) summary
    cd06410
    Location:168 → 264
    PB1_UP2; Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. ...
    cd13999
    Location:869 → 1126
    STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases
Nucleotide Protein
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