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Concanavalin A-like lectin protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838123, updated on 18-Sep-2024

Summary

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Official Full Name
Concanavalin A-like lectin protein kinase family protein
Primary source
TAIR:AT1G15530
Locus tag
AT1G15530
See related
Araport:AT1G15530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
L-type lectin receptor kinase S.1; LecRK-S.1; T16N11.4; T16N11_4
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (5339961..5341931, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pleiotropic drug resistance 12 Neighboring gene miscRNA Neighboring gene 2-oxoglutarate-dependent dioxygenase-like protein Neighboring gene gibberellin 3-oxidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phenotypic analyses of Arabidopsis T-DNA insertion lines and expression profiling reveal that multiple L-type lectin receptor kinases are involved in plant immunity. Wang Y, et al. Mol Plant Microbe Interact, 2014 Dec. PMID 25083911
  2. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
  3. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_101422.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in defense response to bacterium IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in defense response to oomycetes IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in plant-type vacuole HDA PubMed 
located_in plasma membrane HDA PubMed 

General protein information

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Preferred Names
Concanavalin A-like lectin protein kinase family protein
NP_173006.1
  • Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: carbohydrate binding, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: synergid, cultured cell; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G29050.1); Has 122402 Blast hits to 120886 proteins in 4615 species: Archae - 112; Bacteria - 13960; Metazoa - 45016; Fungi - 10521; Plants - 34601; Viruses - 479; Other Eukaryotes - 17713 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    5339961..5341931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101422.1 → NP_173006.1  Concanavalin A-like lectin protein kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173006.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M9E0
    UniProtKB/TrEMBL
    A0A178WKM3, A0A5S9UJX6, A0A654EA15
    Conserved Domains (2) summary
    cd14066
    Location:367 → 630
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam00139
    Location:29 → 288
    Lectin_legB; Legume lectin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M9E0.1

Gene LinkOut

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