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Polyketide cyclase/dehydrase and lipid transport superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838059, updated on 18-Sep-2024

Summary

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Official Full Name
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Primary source
TAIR:AT1G14940
Locus tag
AT1G14940
See related
Araport:AT1G14940
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F10B6.37; F10B6_37
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (5154537..5155564, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GRAS family transcription factor family protein Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001198068.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in defense response IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Polyketide cyclase/dehydrase and lipid transport superfamily protein
NP_001184997.1
  • Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT1G14930.1).
NP_172947.1
  • Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT1G14930.1); Has 362 Blast hits to 333 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    5154537..5155564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101363.4 → NP_172947.1  Polyketide cyclase/dehydrase and lipid transport superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172947.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WJ24, A0A654EKR2, Q39133
    Conserved Domains (1) summary
    smart01037
    Location:2 → 150
    Bet_v_1; Pathogenesis-related protein Bet v I family

  2. NM_001198068.1 → NP_001184997.1  Polyketide cyclase/dehydrase and lipid transport superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001184997.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EKR2, F4HXW5
    Conserved Domains (1) summary
    smart01037
    Location:2 → 134
    Bet_v_1; Pathogenesis-related protein Bet v I family
Nucleotide Protein
Heading Accession and Version

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