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Galactose oxidase/kelch repeat superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837994, updated on 18-Sep-2024

Summary

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Official Full Name
Galactose oxidase/kelch repeat superfamily protein
Primary source
TAIR:AT1G14330
Locus tag
AT1G14330
See related
Araport:AT1G14330
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14L17.10; F14L17_10
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (4890069..4892332, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene Ribosomal protein L16p/L10e family protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene NAD(P)-linked oxidoreductase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular evolution and selection patterns of plant F-box proteins with C-terminal kelch repeats. Schumann N, et al. Plant Physiol, 2011 Feb. PMID 21119043, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_101299.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Galactose oxidase/kelch repeat superfamily protein
NP_172885.1
  • Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G02870.3); Has 8067 Blast hits to 4582 proteins in 289 species: Archae - 6; Bacteria - 418; Metazoa - 6039; Fungi - 16; Plants - 1102; Viruses - 148; Other Eukaryotes - 338 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    4890069..4892332 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101299.4 → NP_172885.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172885.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WKY8, Q9M9S9
    Conserved Domains (2) summary
    PHA03098
    Location:190 → 371
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:226 → 271
    Kelch; KELCH repeat [structural motif]
Nucleotide Protein
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