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CAAX amino terminal protease family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837988, updated on 18-Sep-2024

Summary

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Official Full Name
CAAX amino terminal protease family protein
Primary source
TAIR:AT1G14270
Locus tag
AT1G14270
See related
Araport:AT1G14270
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14L17.3; F14L17_3
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Genomic context

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Location:
chromosome: 1
Exon count:
10
Sequence:
Chromosome: 1; NC_003070.9 (4874875..4877256, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GDA1/CD39 nucleoside phosphatase family protein Neighboring gene GDA1/CD39 nucleoside phosphatase family protein Neighboring gene RING/FYVE/PHD zinc finger superfamily protein Neighboring gene phytochrome kinase substrate 2 Neighboring gene sphingoid base hydroxylase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001084063.1
NM_001123813.1
NM_101293.5
NM_202094.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in CAAX-box protein processing IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
CAAX amino terminal protease family protein
NP_001077532.1
  • CAAX amino terminal protease family protein; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1); Has 3768 Blast hits to 3768 proteins in 1001 species: Archae - 88; Bacteria - 3268; Metazoa - 0; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 280 (source: NCBI BLink).
NP_001117285.1
  • CAAX amino terminal protease family protein; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_563943.2
  • CAAX amino terminal protease family protein; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1); Has 3763 Blast hits to 3760 proteins in 994 species: Archae - 88; Bacteria - 3260; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink).
NP_973823.1
  • CAAX amino terminal protease family protein; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    4874875..4877256 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101293.5 → NP_563943.2  CAAX amino terminal protease family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563943.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WHE4, F4HUI0, Q8LAZ5
    Conserved Domains (2) summary
    COG1266
    Location:187 → 344
    YdiL; Membrane protease YdiL, CAAX protease family [Posttranslational modification, protein turnover, chaperones]
    pfam02517
    Location:243 → 330
    Abi; CAAX protease self-immunity

  2. NM_001084063.1 → NP_001077532.1  CAAX amino terminal protease family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077532.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8RX00
    Conserved Domains (2) summary
    COG1266
    Location:61 → 218
    YdiL; Membrane protease YdiL, CAAX protease family [Posttranslational modification, protein turnover, chaperones]
    pfam02517
    Location:117 → 204
    Abi; CAAX protease self-immunity

  3. NM_202094.2 → NP_973823.1  CAAX amino terminal protease family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973823.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WH42, A8MQF9
    Conserved Domains (2) summary
    COG1266
    Location:81 → 238
    YdiL; Membrane protease YdiL, CAAX protease family [Posttranslational modification, protein turnover, chaperones]
    pfam02517
    Location:137 → 224
    Abi; CAAX protease self-immunity

  4. NM_001123813.1 → NP_001117285.1  CAAX amino terminal protease family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001117285.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8RX00
    Conserved Domains (2) summary
    COG1266
    Location:61 → 218
    YdiL; Membrane protease YdiL, CAAX protease family [Posttranslational modification, protein turnover, chaperones]
    pfam02517
    Location:117 → 204
    Abi; CAAX protease self-immunity
Nucleotide Protein
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