U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

beta-hexosaminidase (DUF1336) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837957, updated on 18-Sep-2024

Summary

Official Full Name
beta-hexosaminidase (DUF1336)
Primary source
TAIR:AT1G13970
Locus tag
AT1G13970
See related
Araport:AT1G13970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F16A14.19
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 1
Exon count:
10
Sequence:
Chromosome: 1; NC_003070.9 (4779351..4782546, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene eukaryotic elongation factor 5A-1 Neighboring gene WRKY DNA-binding protein 4 Neighboring gene sec7 domain-containing protein Neighboring gene plant/protein

General gene information

NM_101263.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
beta-hexosaminidase (DUF1336)
NP_172850.2
  • Protein of unknown function (DUF1336); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT3G29180.2); Has 292 Blast hits to 292 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 248; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    4779351..4782546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101263.5NP_172850.2  beta-hexosaminidase (DUF1336) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172850.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9UC30, A0A654EKE9, Q9XI89
    Conserved Domains (1) summary
    pfam07059
    Location:245488
    DUF1336; Protein of unknown function (DUF1336)