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Purple acid phosphatases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837935, updated on 18-Sep-2024

Summary

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Official Full Name
Purple acid phosphatases superfamily protein
Primary source
TAIR:AT1G13750
Locus tag
AT1G13750
See related
Araport:AT1G13750
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F21F23.18; F21F23_18
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Genomic context

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Location:
chromosome: 1
Exon count:
10
Sequence:
Chromosome: 1; NC_003070.9 (4715394..4718269, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein Neighboring gene ABI five binding protein 2 Neighboring gene ncRNA Neighboring gene Defensin-like (DEFL) family protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. VH1/BRL2 receptor-like kinase interacts with vascular-specific adaptor proteins VIT and VIK to influence leaf venation. Ceserani T, et al. Plant J, 2009 Mar. PMID 19000166, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_101243.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables acid phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Purple acid phosphatases superfamily protein
NP_172830.1
  • Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1802 Blast hits to 1786 proteins in 349 species: Archae - 1; Bacteria - 481; Metazoa - 191; Fungi - 77; Plants - 759; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    4715394..4718269 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101243.5 → NP_172830.1  Purple acid phosphatases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172830.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LMX4
    UniProtKB/TrEMBL
    A0A178WDI0, A0A5S9UB21
    Conserved Domains (3) summary
    cd00839
    Location:284 → 593
    MPP_PAPs; purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain
    pfam17808
    Location:48 → 166
    fn3_PAP; Fn3-like domain from Purple Acid Phosphatase
    pfam16656
    Location:170 → 277
    Pur_ac_phosph_N; Purple acid Phosphatase, N-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LMX4.1

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