DNA ligase-like protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Full Name: DNA ligase-like protein
Primary source: TAIR:AT1G12790
Locus tag: AT1G12790
See related: Araport:AT1G12790
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F13K23.4; F13K23_4
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Chromosome 1 - NC_003070.9 Genomic Context describing neighboring genes

Go to nucleotide: Graphics FASTA GenBank

PTD functions downstream of AtSPO11-1 and AtRAD51 in the meiotic recombination pathway. [PTD]
Title: Arabidopsis PTD is required for type I crossover formation and affects recombination frequency in two different chromosomal regions.
PARTING DANCERS(PTD)gene has an elevated expression level in meiocytes and is involved in normal meiotic homologous recombination. [PTD]
Title: The Arabidopsis thaliana PARTING DANCERS gene encoding a novel protein is required for normal meiotic homologous recombination.

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

NM_101149.4

Function	Evidence Code	Pubs
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in chromosome segregation	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in male meiotic nuclear division	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in plant-type sporogenesis	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in pollen development	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in positive regulation of reciprocal meiotic recombination	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in reciprocal meiotic recombination	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in resolution of meiotic recombination intermediates	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info

NP_563913.1

CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).