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SNARE associated Golgi protein family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837802, updated on 18-Sep-2024

Summary

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Official Full Name
SNARE associated Golgi protein family
Primary source
TAIR:AT1G12450
Locus tag
AT1G12450
See related
Araport:AT1G12450
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F5O11.19; F5O11_19
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (4243904..4245993)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene armadillo repeat kinesin 3 Neighboring gene A20/AN1-like zinc finger family protein Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene zinc ion binding protein Neighboring gene C4-dicarboxylate transporter/malic acid transport protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_101117.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
SNARE associated Golgi protein family
NP_172707.1
  • SNARE associated Golgi protein family; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT4G22850.1); Has 1732 Blast hits to 1729 proteins in 535 species: Archae - 6; Bacteria - 860; Metazoa - 122; Fungi - 106; Plants - 250; Viruses - 0; Other Eukaryotes - 388 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    4243904..4245993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101117.5 → NP_172707.1  SNARE associated Golgi protein family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172707.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WB67, Q6NQK3, Q9LNA0
    Conserved Domains (1) summary
    pfam09335
    Location:121 → 242
    SNARE_assoc; SNARE associated Golgi protein
Nucleotide Protein
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