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RUB3 ubiquitin-related protein 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837750, updated on 18-Sep-2024

Summary

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Official Symbol
RUB3
Official Full Name
ubiquitin-related protein 3
Primary source
TAIR:AT1G11980
Locus tag
AT1G11980
See related
Araport:AT1G11980
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F12F1.15; F12F1_15; ubiquitin-related protein 3
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Genomic context

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See RUB3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (4045619..4045855)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ERD (early-responsive to dehydration stress) family protein Neighboring gene Ubiquitin-like superfamily protein Neighboring gene O-fucosyltransferase family protein Neighboring gene Phosphofructokinase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
ubiquitin-related protein 3
NP_172662.1
  • ubiquitin-related protein 3 (RUB3); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: related to ubiquitin 1 (TAIR:AT1G31340.1); Has 10783 Blast hits to 5743 proteins in 691 species: Archae - 0; Bacteria - 14; Metazoa - 4770; Fungi - 1304; Plants - 2605; Viruses - 173; Other Eukaryotes - 1917 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    4045619..4045855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101070.1 → NP_172662.1  ubiquitin-related protein 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172662.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65381
    UniProtKB/TrEMBL
    A0A178WC32, A0A5S9TYV0
    Conserved Domains (1) summary
    cd01806
    Location:3 → 76
    Ubl_NEDD8; ubiquitin-like (Ubl) domain found in neural precursor cell expressed developmentally down-regulated protein 8 (NEDD8) and similar proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O65381.1

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