U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Plant invertase/pectin methylesterase inhibitor superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837620, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Plant invertase/pectin methylesterase inhibitor superfamily protein
Primary source
TAIR:AT1G10770
Locus tag
AT1G10770
See related
Araport:AT1G10770
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T16B5.9
Summary
Encodes a putative pectin methylesterase/invertase inhibitor. Anti-sense reduction of this gene's transcript results in pollen tube growth retardation and then partial male sterility and reduced seed set.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (3591633..3592580, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene carboxyl-terminal peptidase, putative (DUF239) Neighboring gene ncRNA Neighboring gene Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein Neighboring gene F-box/RNI-like superfamily protein Neighboring gene hydroxyproline-rich glycoprotein family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. BoPMEI1, a pollen-specific pectin methylesterase inhibitor, has an essential role in pollen tube growth. Zhang GY, et al. Planta, 2010 May. PMID 20229192
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

NM_100953.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables enzyme inhibitor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within pollen tube growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Plant invertase/pectin methylesterase inhibitor superfamily protein
NP_563878.1
  • Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: pollen tube growth; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G60760.1); Has 183 Blast hits to 183 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    3591633..3592580 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100953.3 → NP_563878.1  Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563878.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WMJ4, Q8LDL5, Q9SAC5
    Conserved Domains (1) summary
    cd15800
    Location:31 → 166
    PMEI-like_2; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitors
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools