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CPISCA chloroplast-localized ISCA-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837590, updated on 18-Sep-2024

Summary

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Official Symbol
CPISCA
Official Full Name
chloroplast-localized ISCA-like protein
Primary source
TAIR:AT1G10500
Locus tag
AT1G10500
See related
Araport:AT1G10500
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCPISCA; chloroplast-localized ISCA-like protein; T10O24.11; T10O24_11
Summary
Involved in chloroplast Fe-S cluster assembly. Located in the chloroplast stroma. Expressed preferentially in green tissues.
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Genomic context

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See CPISCA in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (3460000..3461485, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene response regulator 4 Neighboring gene zinc finger protein 5 Neighboring gene GNAT acetyltransferase (DUF699) Neighboring gene RNI-like superfamily protein Neighboring gene DNA polymerase lambda (POLL)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Iron-sulfur cluster biogenesis in chloroplasts. Involvement of the scaffold protein CpIscA. Abdel-Ghany SE, et al. Plant Physiol, 2005 May. PMID 15888686, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_100924.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within iron-sulfur cluster assembly IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast stroma IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
chloroplast-localized ISCA-like protein
NP_172520.1
  • chloroplast-localized ISCA-like protein (CPISCA); CONTAINS InterPro DOMAIN/s: FeS cluster insertion, C-terminal, conserved site (InterPro:IPR017870), FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: Iron-sulphur cluster biosynthesis family protein (TAIR:AT5G03905.1); Has 10385 Blast hits to 10384 proteins in 1842 species: Archae - 43; Bacteria - 5944; Metazoa - 237; Fungi - 240; Plants - 172; Viruses - 0; Other Eukaryotes - 3749 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    3460000..3461485 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100924.3 → NP_172520.1  chloroplast-localized ISCA-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172520.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q6NM99, Q9XIK3
    UniProtKB/TrEMBL
    A0A178WPG7, A0A384KXI9, B9DF88
    Conserved Domains (1) summary
    TIGR00049
    Location:74 → 178
    TIGR00049; Iron-sulfur cluster assembly accessory protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9XIK3.2

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