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Pectinacetylesterase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837481, updated on 18-Sep-2024

Summary

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Official Full Name
Pectinacetylesterase family protein
Primary source
TAIR:AT1G09550
Locus tag
AT1G09550
See related
Araport:AT1G09550
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14J9.21; F14J9_21
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Genomic context

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Location:
chromosome: 1
Exon count:
12
Sequence:
Chromosome: 1; NC_003070.9 (3089576..3092327, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene myb domain protein 61 Neighboring gene germin-like protein 5 Neighboring gene phytochrome A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_100826.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Pectinacetylesterase family protein
NP_172426.2
  • Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT1G57590.1); Has 515 Blast hits to 510 proteins in 88 species: Archae - 0; Bacteria - 30; Metazoa - 114; Fungi - 0; Plants - 292; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    3089576..3092327 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100826.3 → NP_172426.2  Pectinacetylesterase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172426.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4I107, O80537
    UniProtKB/TrEMBL
    A0A178WQ27, A0A5S9TGG7
    Conserved Domains (1) summary
    pfam03283
    Location:35 → 385
    PAE; Pectinacetylesterase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4I107.1

Gene LinkOut

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