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ESL1 ERD (early response to dehydration) six-like 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837413, updated on 18-Sep-2024

Summary

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Official Symbol
ESL1
Official Full Name
ERD (early response to dehydration) six-like 1
Primary source
TAIR:AT1G08920
Locus tag
AT1G08920
See related
Araport:AT1G08920
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ERD (early response to dehydration) six-like 1; F7G19.20; F7G19_20
Summary
Encodes ESL1, a transporter for monosaccharides.
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Genomic context

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See ESL1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
17
Sequence:
Chromosome: 1; NC_003070.9 (2867203..2870745)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Major facilitator superfamily protein Neighboring gene Phosphoglycerate mutase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional analysis of an Arabidopsis thaliana abiotic stress-inducible facilitated diffusion transporter for monosaccharides. Yamada K, et al. J Biol Chem, 2010 Jan 8. PMID 19901034, Free PMC Article
  2. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001035928.1
NM_100764.4
NM_179287.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables carbohydrate transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables monosaccharide transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables sugar transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within monosaccharide transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within response to abscisic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to salt stress IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to water deprivation IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in plant-type vacuole membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
ERD (early response to dehydration) six-like 1
NP_001031005.1
  • ERD (early response to dehydration) six-like 1 (ESL1); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_563829.1
  • ERD (early response to dehydration) six-like 1 (ESL1); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 23660 Blast hits to 23155 proteins in 1879 species: Archae - 378; Bacteria - 9422; Metazoa - 4252; Fungi - 6142; Plants - 2335; Viruses - 0; Other Eukaryotes - 1131 (source: NCBI BLink).
NP_849618.1
  • ERD (early response to dehydration) six-like 1 (ESL1); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 22673 Blast hits to 22189 proteins in 1824 species: Archae - 355; Bacteria - 8744; Metazoa - 4150; Fungi - 6023; Plants - 2283; Viruses - 0; Other Eukaryotes - 1118 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    2867203..2870745
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100764.4 → NP_563829.1  ERD (early response to dehydration) six-like 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563829.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0A178WFZ8, B1GXJ7, O04037, Q94KE0, Q9SCW9
    UniProtKB/TrEMBL
    A0A384L1H0, A0A5S9TCG9, A0A654E813
    Conserved Domains (1) summary
    cd17358
    Location:33 → 460
    MFS_GLUT6_8_Class3_like; Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily

  2. NM_179287.2 → NP_849618.1  ERD (early response to dehydration) six-like 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849618.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654E813
    Conserved Domains (2) summary
    cd06174
    Location:36 → 457
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam00083
    Location:36 → 469
    Sugar_tr; Sugar (and other) transporter

  3. NM_001035928.1 → NP_001031005.1  ERD (early response to dehydration) six-like 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031005.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654E813, A8MR75
    Conserved Domains (2) summary
    cd06174
    Location:36 → 425
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam00083
    Location:36 → 425
    Sugar_tr; Sugar (and other) transporter
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q94KE0.1

Gene LinkOut

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