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myosin-binding protein (Protein of unknown function, DUF593) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837402, updated on 18-Sep-2024

Summary

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Official Full Name
myosin-binding protein (Protein of unknown function, DUF593)
Primary source
TAIR:AT1G08800
Locus tag
AT1G08800
See related
Araport:AT1G08800
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22O13.29; F22O13_29; MyoB1; myosin binding protein 1
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (2812818..2818071, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ABI3-interacting protein 3 Neighboring gene 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase epsilon-1, putative (DUF1685) Neighboring gene myb domain protein 60 Neighboring gene vamp/synaptobrevin-associated protein 27-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Lipid droplets in Arabidopsis thaliana leaves contain myosin-binding proteins and enzymes associated with furan-containing fatty acid biosynthesis. Omata Y, et al. Front Plant Sci, 2024. PMID 38495375, Free PMC Article
  2. Identification of myosin XI receptors in Arabidopsis defines a distinct class of transport vesicles. Peremyslov VV, et al. Plant Cell, 2013 Aug. PMID 23995081, Free PMC Article
  3. A J-like protein influences fatty acid composition of chloroplast lipids in Arabidopsis. Ajjawi I, et al. PLoS One, 2011. PMID 22028775, Free PMC Article
  4. Myosin-driven transport network in plants. Kurth EG, et al. Proc Natl Acad Sci U S A, 2017 Feb 21. PMID 28096376, Free PMC Article
  5. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001123778.2
NM_001331788.1
NM_001331789.1
NM_100754.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables myosin XI tail binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables myosin binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in lipid droplet IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in transport vesicle IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
myosin-binding protein (Protein of unknown function, DUF593)
NP_001117250.1
  • Protein of unknown function, DUF593; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT2G30690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_001318957.1
  • Protein of unknown function, DUF593; INVOLVED IN: response to salt stress, N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT2G30690.1); Has 6872 Blast hits to 5400 proteins in 551 species: Archae - 62; Bacteria - 762; Metazoa - 3039; Fungi - 561; Plants - 730; Viruses - 11; Other Eukaryotes - 1707 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    2812818..2818071 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001123778.2 → NP_001117250.1  myosin-binding protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001117250.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HXQ7, Q8GXM3, Q9FRQ9
    UniProtKB/TrEMBL
    A0A654ED66
    Conserved Domains (1) summary
    pfam04576
    Location:891 → 982
    Zein-binding; Zein-binding

  2. NM_001331788.1 → NP_001318957.1  myosin-binding protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HXQ7, Q8GXM3, Q9FRQ9
    UniProtKB/TrEMBL
    A0A654ED66

  3. NM_100754.3 → NP_172357.2  myosin-binding protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172357.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HXQ7, Q8GXM3, Q9FRQ9
    UniProtKB/TrEMBL
    A0A654ED66
    Conserved Domains (1) summary
    pfam04576
    Location:891 → 982
    Zein-binding; Zein-binding

  4. NM_001331789.1 → NP_001321772.1  myosin-binding protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HXQ7, Q8GXM3, Q9FRQ9
    UniProtKB/TrEMBL
    A0A654ED66
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4HXQ7.1

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