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SDH6 succinate dehydrogenase subunit [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837369, updated on 18-Sep-2024

Summary

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Official Symbol
SDH6
Official Full Name
succinate dehydrogenase subunit
Primary source
TAIR:AT1G08480
Locus tag
AT1G08480
See related
Araport:AT1G08480
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
succinate dehydrogenase 6; T27G7.26
Summary
predicted to encode subunit 6 of mitochondrial complex II and to participate in the respiratory chain
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Genomic context

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See SDH6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (2684176..2685702)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Plant-specific transcription factor YABBY family protein Neighboring gene strictosidine synthase-like 3 Neighboring gene chloroplastic NIFS-like cysteine desulfurase Neighboring gene early nodulin-like protein 18 Neighboring gene fatty acyl-ACP thioesterases B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SDH6 and SDH7 Contribute to Anchoring Succinate Dehydrogenase to the Inner Mitochondrial Membrane in Arabidopsis thaliana. Schikowsky C, et al. Plant Physiol, 2017 Feb. PMID 28039307, Free PMC Article
  2. Mitochondrial cytochrome c oxidase and succinate dehydrogenase complexes contain plant specific subunits. Millar AH, et al. Plant Mol Biol, 2004 Sep. PMID 15604729
  3. Functional and composition differences between mitochondrial complex II in Arabidopsis and rice are correlated with the complex genetic history of the enzyme. Huang S, et al. Plant Mol Biol, 2010 Feb. PMID 19924544
  4. Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism. Lee CP, et al. Mol Cell Proteomics, 2008 Jul. PMID 18385124
  5. The Extra-Pathway Interactome of the TCA Cycle: Expected and Unexpected Metabolic Interactions. Zhang Y, et al. Plant Physiol, 2018 Jul. PMID 29794018, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_100721.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein-membrane adaptor activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region HDA PubMed 
located_in mitochondrion HDA PubMed 
located_in plant-type vacuole HDA PubMed 
part_of respiratory chain complex II (succinate dehydrogenase) IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
succinate dehydrogenase subunit
NP_563819.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    2684176..2685702
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100721.5 → NP_563819.1  succinate dehydrogenase subunit [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563819.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q941A6
    UniProtKB/TrEMBL
    A0A178WB84, A0A5S9TAD8, A0A654E9H1
    Conserved Domains (1) summary
    PLN02720
    Location:3 → 142
    PLN02720; complex II
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q941A6.1

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