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Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837354, updated on 18-Sep-2024

Summary

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Official Full Name
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Primary source
TAIR:AT1G08340
Locus tag
AT1G08340
See related
Araport:AT1G08340
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T23G18.20; T23G18_20
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (2630891..2632871)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene bZIP transcription factor family protein Neighboring gene ncRNA Neighboring gene Endomembrane protein 70 protein family Neighboring gene Ribosomal protein L1p/L10e family Neighboring gene decapping 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Initiation of cell wall pattern by a Rho- and microtubule-driven symmetry breaking. Oda Y, et al. Science, 2012 Sep 14. PMID 22984069
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_100707.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
NP_172310.1
  • Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activating protein with PAK-box/P21-Rho-binding domain (TAIR:AT5G22400.1); Has 26346 Blast hits to 14360 proteins in 544 species: Archae - 23; Bacteria - 479; Metazoa - 13985; Fungi - 2813; Plants - 1188; Viruses - 517; Other Eukaryotes - 7341 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    2630891..2632871
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100707.4 → NP_172310.1  Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172310.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q6NKT5, Q9SGC6, Q9SJF6
    UniProtKB/TrEMBL
    A0A178WN79, A0A5S9TAL2, A0A654E942
    Conserved Domains (2) summary
    smart00285
    Location:3 → 37
    PBD; P21-Rho-binding domain
    cd00159
    Location:65 → 217
    RhoGAP; GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6NKT5.1

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