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GRAS family transcription factor [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837266, updated on 10-Oct-2024

Summary

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Official Full Name
GRAS family transcription factor
Primary source
TAIR:AT1G07520
Locus tag
AT1G07520
See related
Araport:AT1G07520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22G5.41; F22G5_41
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (2309534..2312385, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ROTUNDIFOLIA like 3 Neighboring gene uncharacterized protein Neighboring gene FTSH protease 10 Neighboring gene SCARECROW-like 14 Neighboring gene TRF-like 2 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptional regulation of nitrogen-associated metabolism and growth. Gaudinier A, et al. Nature, 2018 Nov. PMID 30356219
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

NM_100626.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
GRAS family transcription factor
NP_172232.1
  • GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29065.1); Has 2426 Blast hits to 2385 proteins in 289 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 2411; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    2309534..2312385 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001331704.1 → NP_001322138.1  GRAS family transcription factor [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AT66

  2. NM_001331705.1 → NP_001322139.1  GRAS family transcription factor [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W5Z6, A0A1P8AT25, A0A384L9U8, A0A654E965, A0A7G2DTP8
    Conserved Domains (1) summary
    pfam03514
    Location:316 → 693
    GRAS; GRAS domain family

  3. NM_001331706.1 → NP_001322137.1  GRAS family transcription factor [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AT66

  4. NM_100626.2 → NP_172232.1  GRAS family transcription factor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172232.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C0SUT7, F4HQP5, Q3EDH0
    UniProtKB/TrEMBL
    A0A654E965, A0A7G2DTP8
    Conserved Domains (1) summary
    pfam03514
    Location:315 → 692
    GRAS; GRAS domain family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3EDH0.3

Gene LinkOut

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