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forkhead-associated domain protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837162, updated on 18-Sep-2024

Summary

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Official Full Name
forkhead-associated domain protein
Primary source
TAIR:AT1G06510
Locus tag
AT1G06510
See related
Araport:AT1G06510
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F12K11.16; F12K11_16
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (1992229..1993841)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene transmembrane protein, putative (DUF3317) Neighboring gene ncRNA Neighboring gene glycerol-3-phosphate acyltransferase 1 Neighboring gene uncharacterized protein Neighboring gene Tropomyosin-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mining the soluble chloroplast proteome by affinity chromatography. Bayer RG, et al. Proteomics, 2011 Apr. PMID 21365755, Free PMC Article
  2. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
  3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_100530.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
forkhead-associated domain protein
NP_172138.2
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 376 Blast hits to 369 proteins in 152 species: Archae - 5; Bacteria - 113; Metazoa - 105; Fungi - 46; Plants - 27; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1992229..1993841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100530.5 → NP_172138.2  forkhead-associated domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172138.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W400, A0A5S9SZG9, A0A654E7L6, Q84K72
    Conserved Domains (1) summary
    COG4372
    Location:12 → 128
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
Nucleotide Protein
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