U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DNA ligase-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837153, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
DNA ligase-like protein
Primary source
TAIR:AT1G06420
Locus tag
AT1G06420
See related
Araport:AT1G06420
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T2D23.12; T2D23_12
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (1958878..1960027)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene trehalose-phosphatase/synthase 7 Neighboring gene FTSH protease 8 Neighboring gene Ubiquitin carboxyl-terminal hydrolase family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_001197994.1
NM_100522.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

Go to the top of the page Help
Preferred Names
DNA ligase-like protein
NP_001184923.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages.
NP_172130.1
  • unknown protein; Has 1017 Blast hits to 654 proteins in 124 species: Archae - 0; Bacteria - 39; Metazoa - 232; Fungi - 69; Plants - 40; Viruses - 0; Other Eukaryotes - 637 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1958878..1960027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100522.3 → NP_172130.1  DNA ligase-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172130.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WF28, A0A5S9SXL7, A0A654E9B2, A0A7G2DR51, Q9LMH9

  2. NM_001197994.1 → NP_001184923.1  DNA ligase-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001184923.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2DR51, F4IDM0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.