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ENTH/VHS/GAT family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837130, updated on 18-Sep-2024

Summary

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Official Full Name
ENTH/VHS/GAT family protein
Primary source
TAIR:AT1G06210
Locus tag
AT1G06210
See related
Araport:AT1G06210
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F9P14.7; F9P14_7
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (1897129..1899237)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Rho termination factor Neighboring gene Peptidase S24/S26A/S26B/S26C family protein Neighboring gene Ribosomal protein S5/Elongation factor G/III/V family protein Neighboring gene CLAVATA3/ESR-RELATED 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis TOL proteins act as gatekeepers for vacuolar sorting of PIN2 plasma membrane protein. Korbei B, et al. Curr Biol, 2013 Dec 16. PMID 24316203
  2. Protein-Protein Interaction Network and Subcellular Localization of the Arabidopsis Thaliana ESCRT Machinery. Richardson LG, et al. Front Plant Sci, 2011. PMID 22639582, Free PMC Article
  3. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_100502.4
NM_202041.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
  
enables ubiquitin binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus ISM
Inferred from Sequence Model
more info
  
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
ENTH/VHS/GAT family protein
NP_563762.1
  • ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT5G16880.2); Has 1326 Blast hits to 1324 proteins in 178 species: Archae - 0; Bacteria - 6; Metazoa - 730; Fungi - 235; Plants - 256; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).
NP_973770.1
  • ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT5G16880.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1897129..1899237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100502.4 → NP_563762.1  ENTH/VHS/GAT family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563762.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IC14, Q9LNC6
    UniProtKB/TrEMBL
    A0A5S9SXI5, A0A654E993
    Conserved Domains (2) summary
    cd03561
    Location:39 → 164
    VHS; VHS (Vps27/Hrs/STAM) domain family
    cd14231
    Location:231 → 308
    GAT_GGA-like_plant; canonical GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants

  2. NM_202041.2 → NP_973770.1  ENTH/VHS/GAT family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973770.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LNC6
    Conserved Domains (1) summary
    cd03561
    Location:39 → 164
    VHS; VHS domain family; The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It has a superhelical structure similar to that of the ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LNC6.1

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