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pfkB-like carbohydrate kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837112, updated on 18-Sep-2024

Summary

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Official Full Name
pfkB-like carbohydrate kinase family protein
Primary source
TAIR:AT1G06030
Locus tag
AT1G06030
See related
Araport:AT1G06030
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T21E18.8; T21E18_8
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (1826803..1828279)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene basic leucine zipper/W2 domain protein Neighboring gene pfkB-like carbohydrate kinase family protein Neighboring gene B-box zinc finger family protein Neighboring gene uncharacterized protein Neighboring gene ENHANCED DISEASE RESISTANCE-like protein (DUF1336)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and biochemical characterization of the fructokinase gene family in Arabidopsis thaliana. Riggs JW, et al. BMC Plant Biol, 2017 Apr 26. PMID 28441933, Free PMC Article
  2. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
  3. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
  4. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  5. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables fructokinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within fructose metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in starch biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
NOT located_in Golgi apparatus RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in extracellular region HDA PubMed 
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
pfkB-like carbohydrate kinase family protein
NP_172093.1
  • pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G06020.1); Has 18996 Blast hits to 18990 proteins in 2425 species: Archae - 390; Bacteria - 14287; Metazoa - 160; Fungi - 120; Plants - 469; Viruses - 0; Other Eukaryotes - 3570 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1826803..1828279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100483.3 → NP_172093.1  pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172093.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LNE3
    UniProtKB/TrEMBL
    A0A178WEN7, A0A5S9SVD0, A0A654E8G1
    Conserved Domains (1) summary
    PLN02323
    Location:1 → 329
    PLN02323; probable fructokinase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LNE3.1

Gene LinkOut

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