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BT3 BTB and TAZ domain protein 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837076, updated on 18-Sep-2024

Summary

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Official Symbol
BT3
Official Full Name
BTB and TAZ domain protein 3
Primary source
TAIR:AT1G05690
Locus tag
AT1G05690
See related
Araport:AT1G05690
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
BTB and TAZ domain protein 3; F3F20.14; F3F20_14
Summary
BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development.
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Genomic context

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See BT3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (1706736..1709360)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene Uridine diphosphate glycosyltransferase 74E2 Neighboring gene Leucine-rich repeat transmembrane protein kinase protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BTB and TAZ domain scaffold proteins perform a crucial function in Arabidopsis development. Robert HS, et al. Plant J, 2009 Apr. PMID 19054356
  2. The transactivation domain within cysteine/histidine-rich region 1 of CBP comprises two novel zinc-binding modules. Newton AL, et al. J Biol Chem, 2000 May 19. PMID 10748221
  3. A novel family of Ca2+/calmodulin-binding proteins involved in transcriptional regulation: interaction with fsh/Ring3 class transcription activators. Du L, et al. Plant Mol Biol, 2004 Mar. PMID 15316289
  4. Arabidopsis has two redundant Cullin3 proteins that are essential for embryo development and that interact with RBX1 and BTB proteins to form multisubunit E3 ubiquitin ligase complexes in vivo. Figueroa P, et al. Plant Cell, 2005 Apr. PMID 15772280, Free PMC Article
  5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_100449.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calmodulin binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within embryo sac development IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within pollen development IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of DNA-templated transcription TAS
Traceable Author Statement
more info
 PubMed 
involved_in response to cold IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to ethylene IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to hydrogen peroxide IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to salicylic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to salt stress IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
BTB and TAZ domain protein 3
NP_172060.2
  • BTB and TAZ domain protein 3 (BT3); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: embryo sac development, pollen development; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 4 (TAIR:AT5G67480.2); Has 1903 Blast hits to 1903 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 1048; Fungi - 0; Plants - 775; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1706736..1709360
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100449.4 → NP_172060.2  BTB and TAZ domain protein 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172060.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SYL0
    UniProtKB/TrEMBL
    A0A178W2C0
    Conserved Domains (4) summary
    smart00225
    Location:65 → 152
    BTB; Broad-Complex, Tramtrack and Bric a brac
    smart00551
    Location:234 → 322
    ZnF_TAZ; TAZ zinc finger, present in p300 and CBP
    cd14734
    Location:155 → 217
    SPOP_C; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
    pfam00651
    Location:45 → 151
    BTB; BTB/POZ domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SYL0.2

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