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B3 domain protein (DUF313) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837067, updated on 18-Sep-2024

Summary

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Official Full Name
B3 domain protein (DUF313)
Primary source
TAIR:AT1G05615
Locus tag
AT1G05615
See related
Araport:AT1G05615
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (1677507..1678270, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene beta-hexosaminidase 2 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene ADP-glucose pyrophosphorylase small subunit 2 Neighboring gene uridine-ribohydrolase 2 Neighboring gene Endonuclease/exonuclease/phosphatase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
B3 domain protein (DUF313)
NP_683278.1
  • Domain of unknown function (DUF313); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF313 (InterPro:IPR005508); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF313) (TAIR:AT2G24670.1); Has 82 Blast hits to 82 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1677507..1678270 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_148437.1 → NP_683278.1  B3 domain protein (DUF313) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_683278.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4I8U3
    UniProtKB/TrEMBL
    A0A178WI51
    Conserved Domains (1) summary
    pfam03754
    Location:73 → 139
    DUF313; Domain of unknown function (DUF313)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4I8U3.1

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