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RPL10B Ribosomal protein L16p/L10e family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837036, updated on 18-Sep-2024

Summary

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Official Symbol
RPL10B
Official Full Name
Ribosomal protein L16p/L10e family protein
Primary source
TAIR:AT1G26910
Locus tag
AT1G26910
See related
Araport:AT1G26910
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ribosomal protein L10 B; T2P11.10; T2P11_10
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Genomic context

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See RPL10B in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (9321650..9323028)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L34e superfamily protein Neighboring gene FBD, F-box and Leucine Rich Repeat domains containing protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene miscRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. New evidence for differential roles of l10 ribosomal proteins from Arabidopsis. Falcone Ferreyra ML, et al. Plant Physiol, 2013 Sep. PMID 23886624, Free PMC Article
  2. Plant L10 ribosomal proteins have different roles during development and translation under ultraviolet-B stress. Falcone Ferreyra ML, et al. Plant Physiol, 2010 Aug. PMID 20516338, Free PMC Article
  3. Isolation and identification of ubiquitin-related proteins from Arabidopsis seedlings. Igawa T, et al. J Exp Bot, 2009. PMID 19429840, Free PMC Article
  4. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931
  5. Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. Ito J, et al. J Proteome Res, 2011 Apr 1. PMID 21166475

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001332734.1
NM_102455.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within developmental process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to UV-B IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
NOT located_in Golgi apparatus RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in chloroplast envelope HDA PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
NOT located_in cytosol RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in ribosome IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

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Preferred Names
Ribosomal protein L16p/L10e family protein
NP_174013.1
  • Ribosomal protein L16p/L10e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to UV-B, developmental process, translation; LOCATED IN: ribosome, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L10e, conserved site (InterPro:IPR018255); BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G14320.1); Has 1680 Blast hits to 1678 proteins in 606 species: Archae - 325; Bacteria - 13; Metazoa - 563; Fungi - 162; Plants - 159; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    9321650..9323028
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102455.3 → NP_174013.1  Ribosomal protein L16p/L10e family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174013.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q08770, Q42327, Q9ZVG7
    UniProtKB/TrEMBL
    A0A178WDE3, A0A384KKM3, C0Z3F6, Q2HIH6
    Conserved Domains (1) summary
    PTZ00173
    Location:1 → 211
    PTZ00173; 60S ribosomal protein L10; Provisional

  2. NM_001332734.1 → NP_001322695.1  Ribosomal protein L16p/L10e family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AUU3, C0Z3F6
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q08770.2

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