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ATSAC1B Phosphoinositide phosphatase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836732, updated on 18-Sep-2024

Summary

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Official Symbol
ATSAC1B
Official Full Name
Phosphoinositide phosphatase family protein
Primary source
TAIR:AT5G66020
Locus tag
AT5G66020
See related
Araport:AT5G66020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATSAC6; IBS2; IMPAIRED IN BABA-INDUCED STERILITY 2; K2A18.9; K2A18_9; SAC DOMAIN-CONTAINING PROTEIN 6; SACIB; SUPPRESSOR OF ACTIN 1B
Summary
Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13.
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Genomic context

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See ATSAC1B in Genome Data Viewer
Location:
chromosome: 5
Exon count:
20
Sequence:
Chromosome: 5; NC_003076.8 (26401193..26404725, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene Golgi-localized GRIP domain-containing protein Neighboring gene sulfurtransferase protein 16 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Three SAC1-like genes show overlapping patterns of expression in Arabidopsis but are remarkably silent during embryo development. Despres B, et al. Plant J, 2003 May. PMID 12713536
  2. The SAC domain-containing protein gene family in Arabidopsis. Zhong R, et al. Plant Physiol, 2003 Jun. PMID 12805586, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in response to salt stress IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Phosphoinositide phosphatase family protein
NP_201403.2
  • SUPPRESSOR OF ACTIN 1B (ATSAC1B); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G51460.1); Has 1740 Blast hits to 1632 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 569; Fungi - 574; Plants - 290; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    26401193..26404725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125999.3 → NP_201403.2  Phosphoinositide phosphatase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201403.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q7X911, Q9FKY0
    UniProtKB/TrEMBL
    A0A178UA62
    Conserved Domains (2) summary
    COG5329
    Location:62 → 545
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam02383
    Location:63 → 349
    Syja_N; SacI homology domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7X911.1

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