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ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836715, updated on 18-Sep-2024

Summary

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Official Full Name
ankyrin repeat family protein
Primary source
TAIR:AT5G65860
Locus tag
AT5G65860
See related
Araport:AT5G65860
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K14B20.3; K14B20_3
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (26347593..26349056, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene receptor like protein 57 Neighboring gene Thioredoxin superfamily protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene phytosulfokine 5 precursor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001037077.1
NM_001345723.1
NM_125983.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein-arginine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ankyrin repeat family protein
NP_001032154.1
  • ankyrin repeat family protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Arginine N-methyltransferase 2 (InterPro:IPR017408), Methyltransferase type 11 (InterPro:IPR013216), Ankyrin repeat (InterPro:IPR002110); Has 14669 Blast hits to 7820 proteins in 738 species: Archae - 65; Bacteria - 1760; Metazoa - 7798; Fungi - 1170; Plants - 439; Viruses - 38; Other Eukaryotes - 3399 (source: NCBI BLink).
NP_201387.2
  • ankyrin repeat family protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Arginine N-methyltransferase 2 (InterPro:IPR017408), Methyltransferase type 11 (InterPro:IPR013216), Ankyrin repeat (InterPro:IPR002110); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    26347593..26349056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125983.2 → NP_201387.2  ankyrin repeat family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201387.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UAE1, A0A5S9YHN8, Q2V2U9
    Conserved Domains (3) summary
    sd00045
    Location:27 → 53
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:27 → 114
    Ank_2; Ankyrin repeats (3 copies)
    cl17173
    Location:178 → 281
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. NM_001037077.1 → NP_001032154.1  ankyrin repeat family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001032154.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YHN8, A0A654GEE6, O49532
    Conserved Domains (3) summary
    sd00045
    Location:7 → 33
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:7 → 94
    Ank_2; Ankyrin repeats (3 copies)
    cl17173
    Location:158 → 261
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. NM_001345723.1 → NP_001329967.1  ankyrin repeat family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YHN8, A0A654GEE6, O49532
    Conserved Domains (3) summary
    sd00045
    Location:7 → 33
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:7 → 94
    Ank_2; Ankyrin repeats (3 copies)
    cl17173
    Location:158 → 261
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
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