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HTR11 histone 3 11 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836660, updated on 18-Sep-2024

Summary

Official Symbol
HTR11
Official Full Name
histone 3 11
Primary source
TAIR:AT5G65350
Locus tag
AT5G65350
See related
Araport:AT5G65350
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
histone 3 11; MNA5.8; MNA5_8
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Genomic context

See HTR11 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (26119211..26119825, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) Neighboring gene miscRNA Neighboring gene Histone superfamily protein Neighboring gene ENTH/ANTH/VHS superfamily protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_125933.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 
located_in plastid HDA PubMed 

General protein information

Preferred Names
histone 3 11
NP_201338.1
  • histone 3 11 (HTR11); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    26119211..26119825 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125933.2NP_201338.1  histone 3 11 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201338.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FKQ3
    UniProtKB/TrEMBL
    A0A178UMK0, A0A5S9YJB9
    Conserved Domains (1) summary
    PTZ00018
    Location:1136
    PTZ00018; histone H3; Provisional