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thionin-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836604, updated on 18-Sep-2024

Summary

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Official Full Name
thionin-like protein
Primary source
TAIR:AT5G64816
Locus tag
AT5G64816
See related
Araport:AT5G64816
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (25912969..25914027)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene WRKY DNA-binding protein 51 Neighboring gene Ras-related small GTP-binding family protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene programmed cell death 2 C-terminal domain-containing protein Neighboring gene general control non-repressible 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001345653.1
NM_125879.4
NM_203265.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in plastid HDA PubMed 

General protein information

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Preferred Names
thionin-like protein
NP_568997.1
  • unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_974994.1
  • unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25912969..25914027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001345652.1 → NP_001331704.1  thionin-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L8Q8
    UniProtKB/TrEMBL
    A0A178UNF2, A0A384K8L2, Q570W1

  2. NM_203265.3 → NP_974994.1  thionin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974994.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L8Q8
    UniProtKB/TrEMBL
    A0A178UNF2, A0A384K8L2, Q570W1

  3. NM_125879.4 → NP_568997.1  thionin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568997.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L8Q8
    UniProtKB/TrEMBL
    A0A178UNF2, A0A384K8L2, Q570W1

  4. NM_001345653.1 → NP_001331705.1  thionin-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L8Q8
    UniProtKB/TrEMBL
    A0A178UNF2, A0A384K8L2, Q570W1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8L8Q8.1

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