U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AAP4 amino acid permease 4 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836505, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
AAP4
Official Full Name
amino acid permease 4
Primary source
TAIR:AT5G63850
Locus tag
AT5G63850
See related
Araport:AT5G63850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
amino acid permease 4; MGI19.6; MGI19_6
Summary
Amino acid transporter whose expression is downregulated by dehydration.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AAP4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Sequence:
Chromosome: 5; NC_003076.8 (25550937..25553656)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene HIT-type Zinc finger family protein Neighboring gene Glycosyl hydrolases family 31 protein Neighboring gene Regulator of chromosome condensation (RCC1) family protein Neighboring gene serine/threonine phosphatase 7

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Substrate specificity and expression profile of amino acid transporters (AAPs) in Arabidopsis. Fischer WN, et al. J Biol Chem, 1995 Jul 7. PMID 7608199
  2. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
  3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_125780.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables acidic amino acid transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables amino acid transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables neutral L-amino acid transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables primary active transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within amino acid transport TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
amino acid permease 4
NP_201190.1
  • amino acid permease 4 (AAP4); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 2 (TAIR:AT5G09220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25550937..25553656
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125780.3 → NP_201190.1  amino acid permease 4 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201190.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q39135, Q8LFM7, Q8RWA8, Q9FN04
    UniProtKB/TrEMBL
    A0A178UDW1, A0A5S9YHG1
    Conserved Domains (1) summary
    pfam01490
    Location:19 → 454
    Aa_trans; Transmembrane amino acid transporter protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FN04.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools